Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | D3M83_00030 | Not Available | Positive | 3958 - 4497 | 20294.5 |
| dna mismatch repair endonuclease muth | D3M83_00035 | Not Available | Positive | 4494 - 5156 | 24351.5 |
| marc family protein | D3M83_00040 | Not Available | Negative | 5220 - 5837 | 22368.3 |
| trna lysidine(34) synthetase tils | D3M83_00045 | Not Available | Negative | 5916 - 7205 | 50545.4 |
| pyridoxal kinase | D3M83_00050 | Not Available | Negative | 7205 - 8071 | 31950.7 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 9091 - 9189 | Not Available |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | D3M83_00055 | Not Available | Negative | 8229 - 9176 | 35019.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 9904 - 10111 | Not Available |
| zinc abc transporter permease subunit znub | D3M83_00060 | Not Available | Negative | 9267 - 10052 | 28278.3 |
| zinc abc transporter atp-binding protein znuc | D3M83_00065 | Not Available | Negative | 10052 - 10855 | 29863.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
