Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-lyase | D3M83_01745 | Not Available | Positive | 357439 - 358629 | 44113.1 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | D3M83_01750 | Not Available | Positive | 358737 - 360092 | 49922.1 |
| hypothetical protein | D3M83_01755 | Not Available | Positive | 360286 - 360792 | 18903.8 |
| sodium/glutamate symporter | D3M83_01760 | Not Available | Negative | 360945 - 362159 | 43703.4 |
| dna topoisomerase iv subunit a | D3M83_01765 | Not Available | Negative | 362193 - 364451 | 83782.2 |
| dna topoisomerase iv subunit b | D3M83_01770 | Not Available | Negative | 364465 - 366363 | 70237.0 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | D3M83_01775 | Not Available | Negative | 366440 - 367375 | 36037.8 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | D3M83_01780 | Not Available | Positive | 367462 - 368892 | 51998.6 |
| 30s ribosomal protein s15 | D3M83_01785 | Not Available | Positive | 369282 - 369551 | 10166.4 |
| penicillin-binding protein 1b | D3M83_01790 | Not Available | Negative | 369657 - 372002 | 88116.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
