Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-asparaginase 2 | D3M83_01695 | Not Available | Positive | 344678 - 345727 | 37299.4 |
| anaerobic c4-dicarboxylate transporter | D3M83_01700 | Not Available | Positive | 345884 - 347206 | 46579.9 |
| hypothetical protein | D3M83_01705 | Not Available | Positive | 347320 - 347955 | 24638.5 |
| threonine ammonia-lyase, biosynthetic | D3M83_01710 | Not Available | Negative | 348014 - 349555 | 56663.9 |
| dihydroxy-acid dehydratase | D3M83_01715 | Not Available | Negative | 349626 - 351464 | 65684.8 |
| hypothetical protein | D3M83_01720 | Not Available | Negative | 351493 - 351845 | 12914.7 |
| type vi secretion system tip protein vgrg | D3M83_01725 | Not Available | Negative | 351846 - 353146 | 49937.7 |
| type vi secretion system atpase tssh | D3M83_01730 | Not Available | Negative | 353242 - 355839 | 96033.4 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | D3M83_01735 | Not Available | Negative | 356034 - 356594 | 21430.9 |
| peroxiredoxin c | D3M83_01740 | Not Available | Negative | 356698 - 357300 | 22357.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
