Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence factor brkb family protein | D3M83_01645 | Not Available | Negative | 336216 - 337052 | 30868.2 |
| ychj family protein | D3M83_01650 | Not Available | Negative | 337049 - 337522 | 17858.4 |
| mosc domain-containing protein | D3M83_01655 | Not Available | Negative | 337512 - 338186 | 24959.8 |
| duf853 domain-containing protein | D3M83_01660 | Not Available | Positive | 338307 - 339806 | 54918.0 |
| uridine phosphorylase | D3M83_01665 | Not Available | Positive | 339962 - 340720 | 27261.6 |
| shikimate 5-dehydrogenase | D3M83_01670 | Not Available | Negative | 340781 - 341596 | 29980.9 |
| serine o-acetyltransferase | D3M83_01675 | Not Available | Negative | 341604 - 342401 | 29131.4 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | D3M83_01680 | Not Available | Negative | 342411 - 343418 | 36822.5 |
| protein-export chaperone secb | D3M83_01685 | Not Available | Negative | 343469 - 343981 | 19157.5 |
| rhodanese-like domain-containing protein | D3M83_01690 | Not Available | Negative | 343956 - 344441 | 18196.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
