Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | D3M83_01545 | Not Available | Positive | 312671 - 313435 | 28579.5 |
| iron-siderophore abc transporter substrate-binding protein | D3M83_01550 | Not Available | Positive | 313548 - 314405 | 31916.4 |
| fe(3+)-hydroxamate abc transporter permease fhub | D3M83_01555 | Not Available | Positive | 314399 - 316369 | 71212.1 |
| tonb-dependent receptor | D3M83_01560 | Not Available | Positive | 316438 - 318606 | 79536.0 |
| tigr01620 family protein | D3M83_01565 | Not Available | Negative | 318647 - 319705 | 40206.0 |
| duf535 domain-containing protein | D3M83_01570 | Not Available | Positive | 319787 - 320668 | 35153.2 |
| ycjx family protein | D3M83_01575 | Not Available | Negative | 320670 - 322112 | 55529.9 |
| abc transporter substrate-binding protein | D3M83_01580 | Not Available | Positive | 322182 - 323879 | 65011.6 |
| abc transporter permease subunit | D3M83_01585 | Not Available | Positive | 323879 - 324844 | 36286.3 |
| antimicrobial peptide abc transporter permease sapc | D3M83_01590 | Not Available | Positive | 324834 - 325721 | 33157.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
