Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | D3M83_01385 | Not Available | Positive | 283234 - 283815 | 21658.8 |
| tpm domain-containing protein | D3M83_01390 | Not Available | Positive | 283826 - 284275 | 17284.9 |
| ygcg family protein | D3M83_01395 | Not Available | Positive | 284268 - 285068 | 28659.0 |
| grx4 family monothiol glutaredoxin | D3M83_01400 | Not Available | Positive | 285153 - 285479 | 12022.6 |
| thiamine abc transporter substrate binding subunit | D3M83_01405 | Not Available | Positive | 285731 - 286729 | 37363.7 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | D3M83_01410 | Not Available | Positive | 286735 - 288339 | 60399.6 |
| thiamine abc transporter atp-binding protein | D3M83_01415 | Not Available | Positive | 288336 - 288965 | 23516.7 |
| biotin synthase biob | D3M83_01420 | Not Available | Positive | 288974 - 289987 | 37442.9 |
| sodium/proline symporter putp | D3M83_01425 | Not Available | Negative | 290039 - 291529 | 53921.6 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | D3M83_01430 | Not Available | Negative | 291700 - 295146 | 128473.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
