Rodentibacter pneumotropicus str. Ppn95

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus str. Ppn95 is a rod-shaped bacterium characterized by its single replicon genome, which is represented by the accession number QXNM00000000.1. This organism's structural morphology is indicative of its classification within the broader context of rod-shaped bacteria, a common shape that often influences the microbe's dynamics in various environments. The presence of a single replicon suggests a streamlined genomic architecture that may reflect adaptations to specific ecological niches or metabolic pathways. The genomic information available for Rodentibacter pneumotropicus str. Ppn95 provides a foundation for understanding its genetic capabilities and potential functions. This strain may exhibit unique traits in terms of metabolic processes, interactions with host organisms, or environmental resilience, though specific metabolic pathways or ecological roles have not been elaborated in the provided data. Thus, while the structural and genomic characteristics of Rodentibacter pneumotropicus str. Ppn95 are established, further research could reveal insights into its ecological significance, particularly in relation to host-microbe interactions or its role in the microbiome of rodent hosts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
StrainPpn95

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain Ppn95 contig_188, whole genome

Gene Summary

Adenine Count

677148 bp

Thymine Count

676482 bp

Guanine Count

453375 bp

Cytosine Count

451890 bp

Genome Length

2258895 bp

Protein-coding Genes

2068 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cdp-diacylglycerol--serine o-phosphatidyltransferaseD3M83_01280Not AvailablePositive256735 - 25810253173.8
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaD3M83_01285Not AvailablePositive258194 - 25928540564.4
trna guanosine(34) transglycosylase tgtD3M83_01290Not AvailablePositive259461 - 26062444265.2
yeih family putative sulfate export transporterD3M83_01300Not AvailablePositive261034 - 26204136292.2
type vi secretion system tip protein vgrgD3M83_01305Not AvailablePositive262265 - 26372856069.6
hypothetical proteinD3M83_01310Not AvailableNegative264045 - 26620774137.0
duf4263 domain-containing proteinD3M83_01315Not AvailablePositive266679 - 26697511776.5
2',3'-cyclic-nucleotide 2'-phosphodiesteraseD3M83_01320Not AvailableNegative267021 - 26899472771.0
amidohydrolaseD3M83_01325Not AvailableNegative269246 - 27052046275.8
trap transporter large permease subunitD3M83_01330Not AvailableNegative270589 - 27188444564.8

Displaying genes 291 – 300 of 2140 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total