Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxylase subunit | D3M83_01230 | Not Available | Negative | 247180 - 248526 | 49076.1 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | D3M83_01235 | Not Available | Negative | 248587 - 249048 | 16262.7 |
| type ii 3-dehydroquinate dehydratase | D3M83_01240 | Not Available | Negative | 249296 - 249748 | 16865.3 |
| o-succinylbenzoate synthase | D3M83_01245 | Not Available | Negative | 249806 - 250798 | 37154.7 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | D3M83_01250 | Not Available | Negative | 250853 - 251710 | 31760.8 |
| hypothetical protein | D3M83_01255 | Not Available | Positive | 251856 - 252422 | 21488.3 |
| phospho-sugar mutase | D3M83_01260 | Not Available | Positive | 252601 - 254259 | 59771.0 |
| qace family quaternary ammonium compound efflux smr transporter | D3M83_01265 | Not Available | Positive | 254329 - 254658 | 11579.7 |
| yitt family protein | D3M83_01270 | Not Available | Positive | 254784 - 255446 | 23622.8 |
| rrna methyltransferase | D3M83_01275 | Not Available | Negative | 255545 - 256585 | 39094.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
