Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | D3M83_00980 | Not Available | Negative | 200871 - 201287 | 15846.2 |
| type vi secretion system contractile sheath large subunit | D3M83_00985 | Not Available | Negative | 201295 - 202782 | 56333.7 |
| type vi secretion system contractile sheath small subunit | D3M83_00990 | Not Available | Negative | 202793 - 203290 | 18457.1 |
| paar domain-containing protein | D3M83_00995 | Not Available | Positive | 203575 - 203844 | 9024.96 |
| type vi secretion system tip protein vgrg | D3M83_01000 | Not Available | Positive | 203905 - 205974 | 78951.9 |
| duf4123 domain-containing protein | D3M83_01005 | Not Available | Positive | 206106 - 207461 | 52730.7 |
| hypothetical protein | D3M83_01010 | Not Available | Positive | 207498 - 210338 | 106313.0 |
| hypothetical protein | D3M83_01015 | Not Available | Positive | 210338 - 211207 | 34720.7 |
| hypothetical protein | D3M83_01020 | Not Available | Positive | 211403 - 212272 | 35067.0 |
| hypothetical protein | D3M83_01025 | Not Available | Positive | 212499 - 212678 | 7126.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
