Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail formation protein i | D3M83_03925 | Not Available | Negative | 812937 - 813476 | 20037.2 |
| Baseplate assembly protein | D3M83_03930 | Not Available | Negative | 813466 - 814380 | 33782.3 |
| Baseplate assembly protein w | D3M83_03935 | Not Available | Negative | 814377 - 814715 | 12829.6 |
| Baseplate assembly protein v | D3M83_03940 | Not Available | Negative | 814712 - 815302 | 20836.5 |
| dna-binding transcriptional regulator | D3M83_03945 | Not Available | Negative | 815440 - 815742 | 11319.9 |
| type ii toxin-antitoxin system rele/pare family toxin | D3M83_03950 | Not Available | Negative | 815735 - 816118 | 14483.5 |
| Tail protein t | D3M83_03955 | Not Available | Negative | 816201 - 817205 | 35996.6 |
| Portal vertex protein | D3M83_09225 | Not Available | Negative | 1911442 - 1912452 | 37721.5 |
| Terminase atpase subunit | D3M83_09230 | Not Available | Negative | 1912461 - 1914239 | 67822.3 |
| Capsid scaffolding protein o | D3M83_09235 | Not Available | Positive | 1914396 - 1915214 | 30589.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
