Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-glyceromanno-heptose 6-epimerase | D3M83_00570 | Not Available | Positive | 108012 - 108938 | 34487.8 |
| lipopolysaccharide heptosyltransferase ii | D3M83_00575 | Not Available | Positive | 109015 - 110061 | 38911.7 |
| lipopolysaccharide heptosyltransferase rfac | D3M83_00580 | Not Available | Positive | 110058 - 111017 | 36500.8 |
| porin | D3M83_00585 | Not Available | Positive | 111174 - 112307 | 42812.8 |
| hsp33 family molecular chaperone hslo | D3M83_00590 | Not Available | Positive | 112515 - 113390 | 32788.0 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | D3M83_00595 | Not Available | Negative | 113526 - 114371 | 32326.2 |
| penicillin-binding protein 1a | D3M83_00600 | Not Available | Negative | 114426 - 117047 | 96258.1 |
| competence protein coma | D3M83_00605 | Not Available | Positive | 117146 - 117982 | 32708.6 |
| hypothetical protein | D3M83_00610 | Not Available | Positive | 117969 - 118487 | 20252.6 |
| hypothetical protein | D3M83_00615 | Not Available | Positive | 118484 - 119002 | 20378.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
