Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | Ppn95 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677148 bp
Thymine Count
676482 bp
Guanine Count
453375 bp
Cytosine Count
451890 bp
Genome Length
2258895 bp
Protein-coding Genes
2068 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase type 11 | D3M83_00365 | Not Available | Negative | 69311 - 70846 | 58759.9 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | D3M83_00370 | Not Available | Negative | 71114 - 71929 | 30670.8 |
| 50s ribosomal protein l33 | D3M83_00375 | Not Available | Negative | 72001 - 72171 | 6563.13 |
| 50s ribosomal protein l28 | D3M83_00380 | Not Available | Negative | 72183 - 72419 | 8985.06 |
| jab domain-containing protein | D3M83_00385 | Not Available | Negative | 72632 - 73294 | 25347.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | D3M83_00390 | Not Available | Positive | 73470 - 74672 | 43051.1 |
| dutp diphosphatase | D3M83_00395 | Not Available | Positive | 74722 - 75177 | 16530.0 |
| nucleoid occlusion factor slma | D3M83_00400 | Not Available | Positive | 75181 - 75837 | 25415.0 |
| yheu family protein | D3M83_00405 | Not Available | Positive | 75859 - 76077 | 8335.1 |
| camp-activated global transcriptional regulator crp | D3M83_00410 | Not Available | Positive | 76097 - 76774 | 25368.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
