Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonate-semialdehyde dehydrogenase (coa acylating) | D3M74_04880 | Not Available | Positive | 1021832 - 1023340 | 54813.1 |
| gfo/idh/moca family oxidoreductase | D3M74_04885 | Not Available | Positive | 1023412 - 1024551 | 42032.6 |
| sugar abc transporter substrate-binding protein | D3M74_04890 | Not Available | Positive | 1024844 - 1025782 | 33985.0 |
| sugar abc transporter substrate-binding protein | D3M74_04895 | Not Available | Positive | 1025864 - 1026796 | 34406.0 |
| sugar abc transporter atp-binding protein | D3M74_04900 | Not Available | Positive | 1026866 - 1028371 | 55802.4 |
| abc transporter permease | D3M74_04905 | Not Available | Positive | 1028421 - 1029374 | 32727.1 |
| ribonuclease r | D3M74_04910 | Not Available | Positive | 1029499 - 1031835 | 89844.3 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | D3M74_04915 | Not Available | Positive | 1031881 - 1032621 | 26643.3 |
| branched-chain amino acid transport system ii carrier protein | D3M74_04920 | Not Available | Negative | 1032700 - 1033998 | 47128.3 |
| na+/h+ antiporter nhaa | D3M74_04925 | Not Available | Positive | 1034232 - 1035395 | 41527.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
