Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | D3M74_04510 | Not Available | Negative | 948146 - 948898 | 28888.8 |
| zinc-binding alcohol dehydrogenase family protein | D3M74_04515 | Not Available | Positive | 949062 - 950090 | 37605.9 |
| trap transporter substrate-binding protein | D3M74_04520 | Not Available | Positive | 950119 - 950975 | 32879.9 |
| calcium-binding protein | D3M74_04525 | Not Available | Negative | 950976 - 951631 | 25098.5 |
| type vi secretion system tip protein vgrg | D3M74_04530 | Not Available | Negative | 952535 - 954763 | 84593.3 |
| sugar transporter | D3M74_04535 | Not Available | Negative | 954821 - 955999 | 42983.8 |
| hypothetical protein | D3M74_04540 | Not Available | Negative | 955999 - 957189 | 44990.7 |
| dctp deaminase | D3M74_04545 | Not Available | Negative | 957190 - 957774 | 21544.8 |
| uridine kinase | D3M74_04550 | Not Available | Negative | 957783 - 958424 | 24378.6 |
| extracellular solute-binding protein | D3M74_04555 | Not Available | Positive | 958592 - 959632 | 37940.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
