Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l10 | D3M74_00025 | Not Available | Negative | 10388 - 10879 | 17631.3 |
| rida family protein | D3M74_00030 | Not Available | Negative | 11167 - 11556 | 13938.8 |
| vacj family lipoprotein | D3M74_00035 | Not Available | Negative | 11620 - 12366 | 27939.2 |
| lps assembly protein lptd | D3M74_00040 | Not Available | Negative | 12412 - 14757 | 89803.2 |
| dna-3-methyladenine glycosylase i | D3M74_00045 | Not Available | Negative | 14803 - 15351 | 20642.0 |
| shikimate dehydrogenase | D3M74_00050 | Not Available | Negative | 15348 - 16166 | 29658.5 |
| trna threonylcarbamoyladenosine biosynthesis protein rimn | D3M74_00055 | Not Available | Negative | 16170 - 16721 | 20001.4 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 17101 - 17199 | Not Available |
| hypothetical protein | D3M74_00060 | Not Available | Negative | 16718 - 17260 | 20491.9 |
| abc transporter atp-binding protein | D3M74_00065 | Not Available | Negative | 17263 - 19191 | 72402.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
