Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dctp family trap transporter solute-binding subunit | D3M74_03000 | Not Available | Negative | 643393 - 644379 | 36343.3 |
| n-acetylmannosamine-6-phosphate 2-epimerase | D3M74_03005 | Not Available | Positive | 644692 - 645378 | 24265.2 |
| rok family protein | D3M74_03010 | Not Available | Positive | 645397 - 646299 | 32019.5 |
| murr/rpir family transcriptional regulator | D3M74_03015 | Not Available | Positive | 646292 - 647158 | 31557.8 |
| n-acetylneuraminate lyase | D3M74_03020 | Not Available | Positive | 647168 - 648046 | 32689.7 |
| glucosamine-6-phosphate deaminase | D3M74_03025 | Not Available | Positive | 648227 - 649033 | 30623.5 |
| n-acetylglucosamine-6-phosphate deacetylase | D3M74_03030 | Not Available | Positive | 649080 - 650234 | 41560.9 |
| class i sam-dependent methyltransferase | D3M74_03035 | Not Available | Positive | 650359 - 651114 | 28218.4 |
| porin | D3M74_03040 | Not Available | Negative | 651239 - 652336 | 40419.3 |
| ribonuclease hi | D3M74_03045 | Not Available | Negative | 652564 - 653028 | 17751.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
