Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | D3M74_01925 | Not Available | Positive | 419292 - 419759 | 17353.2 |
| penicillin-binding protein 2 | D3M74_01930 | Not Available | Positive | 419778 - 421733 | 73691.6 |
| rod shape-determining protein roda | D3M74_01935 | Not Available | Positive | 421733 - 422848 | 41016.8 |
| septal ring lytic transglycosylase rlpa family protein | D3M74_01940 | Not Available | Positive | 422901 - 423764 | 31772.3 |
| serine-type d-ala-d-ala carboxypeptidase | D3M74_01945 | Not Available | Positive | 423785 - 424972 | 43673.3 |
| duf493 family protein | D3M74_01950 | Not Available | Positive | 425082 - 425360 | 10476.7 |
| lipoyl(octanoyl) transferase lipb | D3M74_01955 | Not Available | Positive | 425362 - 426003 | 24048.1 |
| lipoyl synthase | D3M74_01960 | Not Available | Positive | 426052 - 427014 | 36126.7 |
| putative transporter | D3M74_01965 | Not Available | Negative | 427134 - 428789 | 59344.1 |
| abc transporter atp-binding protein/permease | D3M74_01970 | Not Available | Positive | 428953 - 430740 | 67954.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
