Rodentibacter pneumotropicus str. FD1189

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus str. FD1189 is a rod-shaped bacterium characterized by a single replicon in its genome, which can be referenced through the accession number QXNF00000000.1. This structural trait suggests a streamlined genomic architecture that may facilitate efficient replication and maintenance of its genetic material. The rod shape of R. pneumotropicus str. FD1189 is indicative of its potential adaptability to various environments, allowing it to occupy specific ecological niches. The presence of a single replicon may also imply a potentially simpler regulatory mechanism for gene expression and replication compared to organisms with multiple replicons. Understanding the genomic configuration and morphology of R. pneumotropicus str. FD1189 can provide insights into its metabolic capabilities and ecological roles. The morphological and genomic traits of this strain suggest that it may play a specialized role in its environment, potentially interacting with other microbial communities or influencing host organisms in ways not yet fully understood. Further research may reveal additional functional implications of these traits, contributing to our overall understanding of the ecological dynamics in which Rodentibacter pneumotropicus str. FD1189 is involved.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
StrainFD1189

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain FD1189 contig_126, whole

Gene Summary

Adenine Count

676242 bp

Thymine Count

688135 bp

Guanine Count

457899 bp

Cytosine Count

451011 bp

Genome Length

2273287 bp

Protein-coding Genes

2009 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hexose-6-phosphate:phosphate antiporterD3M74_01560Not AvailablePositive342009 - 34339750808.6
response regulatorD3M74_01565Not AvailablePositive343520 - 34412822635.7
signal transduction histidine-protein kinase/phosphatase uhpbD3M74_01570Not AvailablePositive344125 - 34563657284.0
mfs transporterD3M74_01575Not AvailablePositive345638 - 34690947552.2
ybhb/ybcl family raf kinase inhibitor-like proteinD3M74_01580Not AvailableNegative346933 - 34743018205.5
alpha,alpha-phosphotrehalaseD3M74_01585Not AvailableNegative347510 - 34913862892.2
pts trehalose transporter subunit iibcD3M74_01590Not AvailableNegative349276 - 35069450675.2
hth-type transcriptional regulator trerD3M74_01595Not AvailableNegative351005 - 35194635465.5
16s rrna (guanine(1207)-n(2))-methyltransferase rsmcD3M74_01600Not AvailableNegative351953 - 35294537269.1
hypothetical proteinD3M74_01605Not AvailablePositive353057 - 35363521900.4

Displaying genes 351 – 360 of 2095 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total