Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | D3M74_00985 | Not Available | Positive | 224382 - 225446 | 39265.4 |
| duf416 family protein | D3M74_00990 | Not Available | Positive | 225456 - 226046 | 22770.3 |
| hu family dna-binding protein | D3M74_00995 | Not Available | Positive | 226194 - 226466 | 9403.47 |
| deor family transcriptional regulator | D3M74_01000 | Not Available | Positive | 226600 - 227373 | 28734.7 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | D3M74_01005 | Not Available | Positive | 227429 - 229261 | 66894.5 |
| mfs transporter | D3M74_01010 | Not Available | Positive | 229443 - 230660 | 43591.5 |
| nitrate/nitrite two-component system sensor histidine kinase narq | D3M74_01015 | Not Available | Positive | 230782 - 232485 | 65002.8 |
| udp-n-acetylmuramate dehydrogenase | D3M74_01020 | Not Available | Positive | 232495 - 233520 | 38582.2 |
| duf2322 family protein | D3M74_01025 | Not Available | Positive | 233600 - 233917 | 11674.0 |
| rna polymerase sigma factor rpoh | D3M74_01030 | Not Available | Positive | 234035 - 234880 | 32084.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
