Rodentibacter pneumotropicus str. FD1189

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus str. FD1189 is a rod-shaped bacterium characterized by a single replicon in its genome, which can be referenced through the accession number QXNF00000000.1. This structural trait suggests a streamlined genomic architecture that may facilitate efficient replication and maintenance of its genetic material. The rod shape of R. pneumotropicus str. FD1189 is indicative of its potential adaptability to various environments, allowing it to occupy specific ecological niches. The presence of a single replicon may also imply a potentially simpler regulatory mechanism for gene expression and replication compared to organisms with multiple replicons. Understanding the genomic configuration and morphology of R. pneumotropicus str. FD1189 can provide insights into its metabolic capabilities and ecological roles. The morphological and genomic traits of this strain suggest that it may play a specialized role in its environment, potentially interacting with other microbial communities or influencing host organisms in ways not yet fully understood. Further research may reveal additional functional implications of these traits, contributing to our overall understanding of the ecological dynamics in which Rodentibacter pneumotropicus str. FD1189 is involved.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
StrainFD1189

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain FD1189 contig_126, whole

Gene Summary

Adenine Count

676242 bp

Thymine Count

688135 bp

Guanine Count

457899 bp

Cytosine Count

451011 bp

Genome Length

2273287 bp

Protein-coding Genes

2009 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan-associated lipoprotein palD3M74_10550Not AvailableNegative2212021 - 221249116589.2
tol-pal system protein tolbD3M74_10555Not AvailableNegative2212514 - 221379744765.9
cell envelope integrity protein tolaD3M74_10560Not AvailableNegative2213842 - 221495739937.5
colicin uptake protein tolrD3M74_10565Not AvailableNegative2214973 - 221539215298.7
protein tolqD3M74_10570Not AvailableNegative2215459 - 221615125524.3
tol-pal system-associated acyl-coa thioesteraseD3M74_10575Not AvailableNegative2216156 - 221657816161.7
cyd operon protein ybgeD3M74_10580Not AvailableNegative2216670 - 221695411052.9
cytochrome d ubiquinol oxidase subunit iiD3M74_10585Not AvailableNegative2217065 - 221820142216.9
cytochrome bd-i ubiquinol oxidase subunit cydaD3M74_10590Not AvailableNegative2218216 - 221978157989.9
recombinase xerdD3M74_10595Not AvailablePositive2220194 - 222049911231.7

Displaying genes 2031 – 2040 of 2095 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total