Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | D3M74_10340 | Not Available | Positive | 2167435 - 2168781 | 50626.3 |
| dotu family type iv/vi secretion system protein | D3M74_10345 | Not Available | Positive | 2168781 - 2169540 | 29618.7 |
| hypothetical protein | D3M74_10350 | Not Available | Positive | 2169580 - 2170821 | 46795.4 |
| hypothetical protein | D3M74_10355 | Not Available | Negative | 2170937 - 2171095 | 6082.89 |
| hypothetical protein | D3M74_10360 | Not Available | Negative | 2171378 - 2171779 | 13734.2 |
| na+/h+ antiporter nhac family protein | D3M74_10370 | Not Available | Positive | 2174522 - 2176042 | 54097.0 |
| l-lactate permease | D3M74_10375 | Not Available | Positive | 2176264 - 2177859 | 56810.3 |
| (fe-s)-binding protein | D3M74_10380 | Not Available | Positive | 2177992 - 2178726 | 26672.5 |
| iron-sulfur cluster-binding protein | D3M74_10385 | Not Available | Positive | 2178728 - 2180137 | 52279.4 |
| lactate utilization protein c | D3M74_10390 | Not Available | Positive | 2180161 - 2180862 | 25658.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
