Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3M74_10280 | Not Available | Negative | 2151817 - 2152053 | 8610.31 |
| hypothetical protein | D3M74_10285 | Not Available | Positive | 2152877 - 2153061 | 6987.34 |
| hypothetical protein | D3M74_10300 | Not Available | Positive | 2157357 - 2157914 | 21512.7 |
| hcp family type vi secretion system effector | D3M74_10305 | Not Available | Positive | 2158090 - 2158605 | 18893.3 |
| type vi secretion system membrane subunit tssm | D3M74_10310 | Not Available | Negative | 2158741 - 2162427 | 141010.0 |
| type vi secretion system protein tssa | D3M74_10315 | Not Available | Negative | 2162424 - 2163526 | 41631.5 |
| hypothetical protein | D3M74_10320 | Not Available | Negative | 2163527 - 2165075 | 53562.2 |
| type vi secretion system baseplate subunit tssg | D3M74_10325 | Not Available | Positive | 2165076 - 2165966 | 34522.2 |
| hypothetical protein | D3M74_10330 | Not Available | Positive | 2165967 - 2166734 | 29162.7 |
| type vi secretion system lipoprotein tssj | D3M74_10335 | Not Available | Positive | 2166748 - 2167431 | 25786.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
