Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | D3M74_08510 | Not Available | Positive | 1744373 - 1745479 | 40113.6 |
| histidine--trna ligase | D3M74_08515 | Not Available | Positive | 1745489 - 1746760 | 47644.1 |
| hypothetical protein | D3M74_08520 | Not Available | Positive | 1746779 - 1747393 | 22404.4 |
| superoxide dismutase | D3M74_08525 | Not Available | Negative | 1747645 - 1748292 | 24073.4 |
| cytochrome c biogenesis heme-transporting atpase ccma | D3M74_08530 | Not Available | Positive | 1748587 - 1749225 | 23717.5 |
| heme exporter protein ccmb | D3M74_08535 | Not Available | Positive | 1749230 - 1749895 | 23910.8 |
| heme abc transporter permease | D3M74_08540 | Not Available | Positive | 1749953 - 1750696 | 27879.9 |
| heme exporter protein ccmd | D3M74_08545 | Not Available | Positive | 1750725 - 1750931 | 7934.58 |
| cytochrome c maturation protein ccme | D3M74_08550 | Not Available | Positive | 1750928 - 1751452 | 19336.4 |
| heme lyase ccmf/nrfe family subunit | D3M74_08555 | Not Available | Positive | 1751449 - 1753395 | 72568.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
