Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D3M74_08360 | Not Available | Positive | 1716792 - 1717142 | 14405.0 |
| mfs transporter | D3M74_08365 | Not Available | Negative | 1717264 - 1718589 | 49579.7 |
| xylose operon transcription regulator xylr | D3M74_08370 | Not Available | Negative | 1718715 - 1719884 | 44916.6 |
| sugar abc transporter permease | D3M74_08375 | Not Available | Negative | 1719984 - 1721111 | 39712.0 |
| d-xylose abc transporter atp-binding protein | D3M74_08380 | Not Available | Negative | 1721115 - 1722626 | 55697.3 |
| d-xylose abc transporter substrate-binding protein | D3M74_08385 | Not Available | Negative | 1722672 - 1723670 | 35899.3 |
| xylose isomerase | D3M74_08390 | Not Available | Positive | 1723909 - 1725228 | 49958.1 |
| xylulokinase | D3M74_08395 | Not Available | Positive | 1725284 - 1726765 | 54682.6 |
| trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trml | D3M74_08400 | Not Available | Negative | 1726797 - 1727282 | 18378.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | D3M74_08405 | Not Available | Negative | 1727291 - 1727872 | 21999.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
