Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | D3M74_08205 | Not Available | Positive | 1689469 - 1689957 | 19008.3 |
| hypoxanthine phosphoribosyltransferase | D3M74_08210 | Not Available | Negative | 1690028 - 1690567 | 20209.5 |
| metalloprotease pmba | D3M74_08215 | Not Available | Negative | 1690770 - 1692125 | 48618.5 |
| ribosome-associated protein | D3M74_08220 | Not Available | Positive | 1692214 - 1692750 | 20942.3 |
| lps export abc transporter periplasmic protein lptc | D3M74_08225 | Not Available | Positive | 1692842 - 1693447 | 22621.8 |
| lipopolysaccharide transport periplasmic protein lpta | D3M74_08230 | Not Available | Positive | 1693428 - 1693943 | 18755.7 |
| lipopolysaccharide abc transporter atp-binding protein | D3M74_08235 | Not Available | Positive | 1693947 - 1694672 | 26940.6 |
| pts iia-like nitrogen-regulatory protein ptsn | D3M74_08240 | Not Available | Positive | 1694675 - 1695178 | 18648.2 |
| d-alanyl-d-alanine carboxypeptidase family protein | D3M74_08250 | Not Available | Negative | 1696087 - 1696767 | 26333.5 |
| succinyl-diaminopimelate desuccinylase | D3M74_08255 | Not Available | Negative | 1696768 - 1697907 | 41713.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
