Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | FD1189 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
676242 bp
Thymine Count
688135 bp
Guanine Count
457899 bp
Cytosine Count
451011 bp
Genome Length
2273287 bp
Protein-coding Genes
2009 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoethanolamine transferase | D3M74_06055 | Not Available | Negative | 1270369 - 1271931 | 59409.6 |
| ump kinase | D3M74_06060 | Not Available | Positive | 1272062 - 1272775 | 25710.6 |
| ribosome recycling factor | D3M74_06065 | Not Available | Positive | 1272867 - 1273424 | 20709.9 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | D3M74_06070 | Not Available | Positive | 1273614 - 1274810 | 43506.6 |
| di-trans,poly-cis-decaprenylcistransferase | D3M74_06075 | Not Available | Positive | 1274838 - 1275557 | 27792.4 |
| phosphatidate cytidylyltransferase | D3M74_06080 | Not Available | Positive | 1275569 - 1276435 | 32151.8 |
| sigma e protease regulator rsep | D3M74_06085 | Not Available | Positive | 1276445 - 1277776 | 48786.6 |
| outer membrane protein assembly factor bama | D3M74_06090 | Not Available | Positive | 1277804 - 1280185 | 87302.4 |
| omph family outer membrane protein | D3M74_06095 | Not Available | Positive | 1280287 - 1280898 | 22343.6 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | D3M74_06100 | Not Available | Positive | 1280911 - 1281936 | 35830.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
