Rodentibacter pneumotropicus str. FD1189

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus str. FD1189 is a rod-shaped bacterium characterized by a single replicon in its genome, which can be referenced through the accession number QXNF00000000.1. This structural trait suggests a streamlined genomic architecture that may facilitate efficient replication and maintenance of its genetic material. The rod shape of R. pneumotropicus str. FD1189 is indicative of its potential adaptability to various environments, allowing it to occupy specific ecological niches. The presence of a single replicon may also imply a potentially simpler regulatory mechanism for gene expression and replication compared to organisms with multiple replicons. Understanding the genomic configuration and morphology of R. pneumotropicus str. FD1189 can provide insights into its metabolic capabilities and ecological roles. The morphological and genomic traits of this strain suggest that it may play a specialized role in its environment, potentially interacting with other microbial communities or influencing host organisms in ways not yet fully understood. Further research may reveal additional functional implications of these traits, contributing to our overall understanding of the ecological dynamics in which Rodentibacter pneumotropicus str. FD1189 is involved.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
StrainFD1189

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain FD1189 contig_126, whole

Gene Summary

Adenine Count

676242 bp

Thymine Count

688135 bp

Guanine Count

457899 bp

Cytosine Count

451011 bp

Genome Length

2273287 bp

Protein-coding Genes

2009 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrate reductaseD3M74_05695Not AvailableNegative1196223 - 119732040642.1
extracellular solute-binding proteinD3M74_05700Not AvailableNegative1197559 - 119864439950.3
spermidine/putrescine abc transporter permease potcD3M74_05705Not AvailableNegative1198778 - 119954828515.8
spermidine/putrescine abc transporter permease potbD3M74_05710Not AvailableNegative1199548 - 120040832304.4
spermidine/putrescine abc transporter atp-binding protein potaD3M74_05715Not AvailableNegative1200395 - 120154043344.3
pqib family proteinD3M74_05720Not AvailableNegative1202002 - 120467798061.9
paraquat-inducible protein aD3M74_05725Not AvailableNegative1204670 - 120591747701.6
rna chaperone proqD3M74_05730Not AvailablePositive1206141 - 120678824074.0
carboxy terminal-processing peptidaseD3M74_05735Not AvailablePositive1206822 - 120889778548.7
l,d-transpeptidaseD3M74_05740Not AvailablePositive1208961 - 121042154648.8

Displaying genes 1141 – 1150 of 2095 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total