Rodentibacter pneumotropicus str. 607_10

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus strain 607_10 is characterized as a rod-shaped bacterium with a single replicon in its genome, as indicated by the genome accession QXNH00000000.1. This structural trait suggests a streamlined genomic organization, which may have implications for its metabolic capabilities and adaptability. The rod shape is a common morphology among many bacteria, potentially influencing its motility and nutrient acquisition strategies. The presence of only one replicon may also affect the bacterium's replication and gene regulation processes, allowing for a more efficient division under certain environmental conditions. While specific ecological roles or pathogenicity traits of Rodentibacter pneumotropicus str. 607_10 are not detailed in the provided data, the traits known thus far suggest it occupies a niche where such structural adaptations confer advantages for survival and proliferation. Overall, the rod shape coupled with a single-replicon genome may enable Rodentibacter pneumotropicus str. 607_10 to thrive in specific environments, possibly related to its interactions with host organisms or its role within a microbial community. Such adaptations could play a crucial role in its ecological dynamics, although further research would be necessary to elucidate these relationships.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
Strain607_10

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain 607_10 contig_120, whole

Gene Summary

Adenine Count

700159 bp

Thymine Count

704773 bp

Guanine Count

469499 bp

Cytosine Count

465199 bp

Genome Length

2339630 bp

Protein-coding Genes

2071 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerophosphodiester phosphodiesteraseD3M77_01260Not AvailablePositive259277 - 26063550873.1
serine-type d-ala-d-ala carboxypeptidaseD3M77_01265Not AvailableNegative260747 - 26218652615.4
transcription elongation factor greaD3M77_01270Not AvailablePositive262351 - 26282717493.9
ribosome assembly rna-binding protein yhbyD3M77_01275Not AvailableNegative262871 - 26317010927.5
23s rrna (uridine(2552)-2'-o)-methyltransferase rlmeD3M77_01280Not AvailablePositive263324 - 26396223797.9
atp-dependent zinc metalloprotease ftshD3M77_01285Not AvailablePositive264050 - 26595770284.6
hypothetical proteinD3M77_01290Not AvailablePositive266290 - 2665359486.08
hypothetical proteinD3M77_01295Not AvailablePositive266720 - 26744827888.6
5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferaseD3M77_01300Not AvailableNegative267547 - 26982385973.4
duf4123 domain-containing proteinD3M77_01305Not AvailablePositive270155 - 27154955103.6

Displaying genes 361 – 370 of 2196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total