Rodentibacter pneumotropicus str. 607_10

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus strain 607_10 is characterized as a rod-shaped bacterium with a single replicon in its genome, as indicated by the genome accession QXNH00000000.1. This structural trait suggests a streamlined genomic organization, which may have implications for its metabolic capabilities and adaptability. The rod shape is a common morphology among many bacteria, potentially influencing its motility and nutrient acquisition strategies. The presence of only one replicon may also affect the bacterium's replication and gene regulation processes, allowing for a more efficient division under certain environmental conditions. While specific ecological roles or pathogenicity traits of Rodentibacter pneumotropicus str. 607_10 are not detailed in the provided data, the traits known thus far suggest it occupies a niche where such structural adaptations confer advantages for survival and proliferation. Overall, the rod shape coupled with a single-replicon genome may enable Rodentibacter pneumotropicus str. 607_10 to thrive in specific environments, possibly related to its interactions with host organisms or its role within a microbial community. Such adaptations could play a crucial role in its ecological dynamics, although further research would be necessary to elucidate these relationships.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
Strain607_10

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain 607_10 contig_120, whole

Gene Summary

Adenine Count

700159 bp

Thymine Count

704773 bp

Guanine Count

469499 bp

Cytosine Count

465199 bp

Genome Length

2339630 bp

Protein-coding Genes

2071 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heme abc transporter permeaseD3M77_00430Not AvailablePositive85893 - 8663627879.9
heme exporter protein ccmdD3M77_00435Not AvailablePositive86665 - 868717934.58
cytochrome c maturation protein ccmeD3M77_00440Not AvailablePositive86868 - 8739219336.4
heme lyase ccmf/nrfe family subunitD3M77_00445Not AvailablePositive87389 - 8933572568.0
dsbe family thiol:disulfide interchange proteinD3M77_00450Not AvailablePositive89466 - 9001420566.1
cytochrome c-type biogenesis protein ccmhD3M77_00455Not AvailablePositive90011 - 9047517403.0
c-type cytochrome biogenesis protein ccmiD3M77_00460Not AvailablePositive90476 - 9139335167.3
hypothetical proteinD3M77_00470Not AvailablePositive91791 - 9235121079.7
hypothetical proteinD3M77_00475Not AvailablePositive92348 - 9264110870.1
galactose/methyl galactoside abc transporter permease mglcD3M77_00480Not AvailableNegative92716 - 9372635831.6

Displaying genes 211 – 220 of 2196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total