Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Rodentibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Rodentibacter |
| Species | Rodentibacter pneumotropicus |
| Strain | 607_10 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Rodentia |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
700159 bp
Thymine Count
704773 bp
Guanine Count
469499 bp
Cytosine Count
465199 bp
Genome Length
2339630 bp
Protein-coding Genes
2071 genes
Non-Coding Genes
125 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide abc transporter substrate-binding protein oppa | D3M77_10395 | Not Available | Positive | 2164492 - 2166129 | 61222.0 |
| oligopeptide abc transporter permease oppb | D3M77_10400 | Not Available | Positive | 2166244 - 2167164 | 33808.6 |
| oligopeptide abc transporter permease oppc | D3M77_10405 | Not Available | Positive | 2167174 - 2168097 | 34058.5 |
| abc transporter atp-binding protein | D3M77_10410 | Not Available | Positive | 2168107 - 2169108 | 36887.1 |
| abc transporter atp-binding protein | D3M77_10415 | Not Available | Positive | 2169105 - 2170094 | 36703.1 |
| large-conductance mechanosensitive channel protein mscl | D3M77_10420 | Not Available | Negative | 2170207 - 2170596 | 14049.7 |
| trk system potassium transporter trka | D3M77_10425 | Not Available | Negative | 2170665 - 2172041 | 50132.6 |
| glycosyltransferase family 2 protein | D3M77_10430 | Not Available | Negative | 2172038 - 2172844 | 29550.5 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | D3M77_10435 | Not Available | Negative | 2172862 - 2174244 | 51698.8 |
| methionyl-trna formyltransferase | D3M77_10440 | Not Available | Negative | 2174244 - 2175200 | 34857.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
