Rodentibacter pneumotropicus str. 607_10

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus strain 607_10 is characterized as a rod-shaped bacterium with a single replicon in its genome, as indicated by the genome accession QXNH00000000.1. This structural trait suggests a streamlined genomic organization, which may have implications for its metabolic capabilities and adaptability. The rod shape is a common morphology among many bacteria, potentially influencing its motility and nutrient acquisition strategies. The presence of only one replicon may also affect the bacterium's replication and gene regulation processes, allowing for a more efficient division under certain environmental conditions. While specific ecological roles or pathogenicity traits of Rodentibacter pneumotropicus str. 607_10 are not detailed in the provided data, the traits known thus far suggest it occupies a niche where such structural adaptations confer advantages for survival and proliferation. Overall, the rod shape coupled with a single-replicon genome may enable Rodentibacter pneumotropicus str. 607_10 to thrive in specific environments, possibly related to its interactions with host organisms or its role within a microbial community. Such adaptations could play a crucial role in its ecological dynamics, although further research would be necessary to elucidate these relationships.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
Strain607_10

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain 607_10 contig_120, whole

Gene Summary

Adenine Count

700159 bp

Thymine Count

704773 bp

Guanine Count

469499 bp

Cytosine Count

465199 bp

Genome Length

2339630 bp

Protein-coding Genes

2071 genes

Non-Coding Genes

125 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide transport periplasmic protein lptaD3M77_05685Not AvailableNegative1193900 - 119441518755.7
lps export abc transporter periplasmic protein lptcD3M77_05690Not AvailableNegative1194396 - 119500122621.8
ribosome-associated proteinD3M77_05695Not AvailableNegative1195093 - 119562920942.3
metalloprotease pmbaD3M77_05700Not AvailablePositive1195718 - 119707348618.5
hypoxanthine phosphoribosyltransferaseD3M77_05705Not AvailablePositive1197276 - 119781520209.5
nuclear transport factor 2 family proteinD3M77_05710Not AvailableNegative1197886 - 119837419008.3
mfs transporterD3M77_05715Not AvailableNegative1198384 - 119945440290.7
molybdopterin-synthase adenylyltransferase moebD3M77_05720Not AvailableNegative1199649 - 120038026935.1
molybdopterin molybdotransferaseD3M77_05725Not AvailableNegative1200380 - 120159744456.8
gtp cyclohydrolase i foleD3M77_05730Not AvailablePositive1201779 - 120243524669.7

Displaying genes 1141 – 1150 of 2196 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total