Rodentibacter pneumotropicus str. 394_12

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus str. 394_12 is a rod-shaped bacterium characterized by a single replicon in its genome. The genomic data for this strain is cataloged under the accession QXND00000000.1, allowing for further genomic analysis and study. The rod shape of this microbe suggests a potential adaptation to its ecological niche, facilitating motility and interaction with its environment. Although specific details regarding its ecological role or pathogenicity are not provided, the structural characteristics of Rodentibacter pneumotropicus str. 394_12 may influence its interactions within microbial communities, particularly in environments associated with rodent hosts. Understanding the genomic framework and morphology of this strain could provide insights into its biological functions and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
Strain394_12

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain 394_12 contig_152, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system tip protein vgrgD3M72_02245Not AvailablePositive466559 - 46787350284.7
elongation factor pD3M72_02250Not AvailableNegative467935 - 46850120643.6
ef-p beta-lysylation protein epmbD3M72_02255Not AvailablePositive468536 - 46955238704.2
acetylglucosamine transferaseD3M72_02260Not AvailablePositive469651 - 47097947936.4
opacity-associated protein oapbD3M72_02265Not AvailablePositive471028 - 47143215255.7
dna repair protein recoD3M72_02270Not AvailablePositive471436 - 47214626931.7
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdD3M72_02275Not AvailablePositive472146 - 47346250123.9
gtp diphosphokinaseD3M72_02280Not AvailablePositive473539 - 47577084874.2
diacylglycerol kinaseD3M72_02285Not AvailablePositive475784 - 47614012829.9
deor/glpr transcriptional regulatorD3M72_02290Not AvailableNegative476209 - 47696728160.2

Displaying genes 471 – 480 of 2130 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total