Rodentibacter pneumotropicus str. 394_12

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Rodentibacter

Description

Rodentibacter pneumotropicus str. 394_12 is a rod-shaped bacterium characterized by a single replicon in its genome. The genomic data for this strain is cataloged under the accession QXND00000000.1, allowing for further genomic analysis and study. The rod shape of this microbe suggests a potential adaptation to its ecological niche, facilitating motility and interaction with its environment. Although specific details regarding its ecological role or pathogenicity are not provided, the structural characteristics of Rodentibacter pneumotropicus str. 394_12 may influence its interactions within microbial communities, particularly in environments associated with rodent hosts. Understanding the genomic framework and morphology of this strain could provide insights into its biological functions and ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusRodentibacter
SpeciesRodentibacter pneumotropicus
Strain394_12

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Rodentia
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rodentibacter pneumotropicus strain 394_12 contig_152, whole

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-methionine abc transporter, atp-binding proteinD3M72_09385Not AvailablePositive1948198 - 194923537768.8
abc transporter permeaseD3M72_09390Not AvailablePositive1949225 - 194991424982.3
metq/nlpa family lipoproteinD3M72_09395Not AvailablePositive1949950 - 195077429952.7
hypothetical proteinD3M72_09400Not AvailableNegative1950852 - 195178136361.9
50s ribosomal protein l1D3M72_09405Not AvailableNegative1951909 - 195259824096.3
50s ribosomal protein l11D3M72_09410Not AvailableNegative1952603 - 195303114932.5
transcription termination/antitermination protein nusgD3M72_09415Not AvailableNegative1953274 - 195383121280.3
preprotein translocase subunit seceD3M72_09420Not AvailableNegative1953833 - 195424615326.8
atp-dependent protease atp-binding subunit clpxD3M72_09425Not AvailableNegative1954389 - 195563945803.6
atp-dependent clp endopeptidase proteolytic subunit clppD3M72_09430Not AvailableNegative1955649 - 195623021445.9

Displaying genes 1821 – 1830 of 2130 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Rodent abscessCausesPMC6814026

Displaying health effects 1 – 1 of 1 in total