Histophilus somni str. UOC-EPH-KLM-014

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni str. UOC-EPH-KLM-014 is a Gram-negative, rod-shaped bacterium with an optimal growth temperature of 35.0°C. This strain is classified as a facultative anaerobe, indicating its capability to thrive in both aerobic and anaerobic environments, though it preferentially utilizes oxygen when available. H. somni is primarily host-associated, suggesting a close relationship with its biological hosts, which may influence its physiological adaptations and survival strategies. The combination of its rod shape and metabolic flexibility allows it to colonize various niches within host organisms, potentially utilizing different metabolic pathways depending on the availability of oxygen and other environmental conditions. The ecological role of H. somni str. UOC-EPH-KLM-014 may involve interactions with the host's microbiota or immune system, providing insights into its potential contributions to the host's health and disease dynamics. Understanding these traits can facilitate further studies on H. somni's biology and its interactions within host ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainUOC-EPH-KLM-014

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Bos taurus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni strain UOC-EPH-KLM-014 Contig_128, whole genome

Gene Summary

Adenine Count

694212 bp

Thymine Count

705085 bp

Guanine Count

415406 bp

Cytosine Count

414185 bp

Genome Length

2228888 bp

Protein-coding Genes

1895 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fcd domain-containing proteinFAZ28_01685Not AvailableNegative352710 - 35345928958.9
alcohol dehydrogenaseFAZ28_01690Not AvailablePositive353621 - 35464637257.9
trap transporter substrate-binding proteinFAZ28_01695Not AvailablePositive354675 - 35565837496.6
trap transporter small permeaseFAZ28_01700Not AvailablePositive355723 - 35620218139.0
trap transporter large permeaseFAZ28_01705Not AvailablePositive356199 - 35747345710.7
5-oxoprolinase subunit pxpbFAZ28_01710Not AvailablePositive357659 - 35830624120.7
biotin-dependent carboxyltransferase family proteinFAZ28_01715Not AvailablePositive358303 - 35923234061.9
5-oxoprolinase subunit pxpaFAZ28_01720Not AvailablePositive359219 - 35996226731.1
divalent metal cation transporterFAZ28_01725Not AvailablePositive360088 - 36127541248.9
arabinose operon transcriptional regulator aracFAZ28_01730Not AvailablePositive361387 - 36224733346.4

Displaying genes 481 – 490 of 2057 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PneumoniaCausesPMC281138
Bovine respiratory diseaseCausesPMC12473052
BrdCausesPMC12473052
Bovine respiratory disease complexCausesPMC12943494
BrdcCausesPMC12943494

Displaying health effects 1 – 5 of 5 in total