Histophilus somni str. UOC-EPH-KLM-014

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni str. UOC-EPH-KLM-014 is a Gram-negative, rod-shaped bacterium with an optimal growth temperature of 35.0°C. This strain is classified as a facultative anaerobe, indicating its capability to thrive in both aerobic and anaerobic environments, though it preferentially utilizes oxygen when available. H. somni is primarily host-associated, suggesting a close relationship with its biological hosts, which may influence its physiological adaptations and survival strategies. The combination of its rod shape and metabolic flexibility allows it to colonize various niches within host organisms, potentially utilizing different metabolic pathways depending on the availability of oxygen and other environmental conditions. The ecological role of H. somni str. UOC-EPH-KLM-014 may involve interactions with the host's microbiota or immune system, providing insights into its potential contributions to the host's health and disease dynamics. Understanding these traits can facilitate further studies on H. somni's biology and its interactions within host ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainUOC-EPH-KLM-014

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Bos taurus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni strain UOC-EPH-KLM-014 Contig_128, whole genome

Gene Summary

Adenine Count

694212 bp

Thymine Count

705085 bp

Guanine Count

415406 bp

Cytosine Count

414185 bp

Genome Length

2228888 bp

Protein-coding Genes

1895 genes

Non-Coding Genes

162 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosomal-protein-alanine n-acetyltransferaseFAZ28_09710Not AvailableNegative2020915 - 202136117057.7
dna polymerase iii subunit psiFAZ28_09715Not AvailableNegative2021365 - 202176916305.9
endopeptidase laFAZ28_09720Not AvailableNegative2021947 - 202435890402.1
protease modulator hflcFAZ28_09725Not AvailableNegative2024647 - 202553433423.2
ftsh protease activity modulator hflkFAZ28_09730Not AvailableNegative2025534 - 202679647382.0
atp-dependent 6-phosphofructokinaseFAZ28_09735Not AvailableNegative2027093 - 202805835268.5
cation diffusion facilitator family transporterFAZ28_09740Not AvailableNegative2028171 - 202906733427.2
hypothetical proteinFAZ28_09745Not AvailableNegative2029082 - 202963621851.4
peroxide stress protein yaaaFAZ28_09750Not AvailableNegative2029633 - 203040929471.5
uracil-dna glycosylaseFAZ28_09755Not AvailableNegative2030425 - 203109625539.5

Displaying genes 1911 – 1920 of 2057 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PneumoniaCausesPMC281138
Bovine respiratory diseaseCausesPMC12473052
BrdCausesPMC12473052
Bovine respiratory disease complexCausesPMC12943494
BrdcCausesPMC12943494

Displaying health effects 1 – 5 of 5 in total