Histophilus somni str. UOC-EPH-KLM-013

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni str. UOC-EPH-KLM-013 is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic metabolism, allowing it to thrive in varying oxygen environments. This strain is optimally active at a temperature of 35.0°C, which is typical of the physiological conditions found in its host-associated habitat. As a member of the genus Histophilus, this bacterium is adapted to living in association with animal hosts, reflecting its potential role in the microbiota of specific wildlife or livestock species. The facultative anaerobic nature of H. somni str. UOC-EPH-KLM-013 suggests it can survive in both aerobic and anaerobic environments, which may facilitate its colonization and persistence in diverse biological niches within its host. The ability to thrive at a temperature close to that of the mammalian body indicates that this strain may have evolved mechanisms to endure host-specific challenges, further underscoring its ecological significance. Understanding the characteristics of this strain can provide insights into its interactions within the host and potential implications for host health, given the complexities of host-associated microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainUOC-EPH-KLM-013

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Bos taurus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni strain UOC-EPH-KLM-013 Contig_197, whole genome

Gene Summary

Adenine Count

759889 bp

Thymine Count

757514 bp

Guanine Count

456321 bp

Cytosine Count

432615 bp

Genome Length

2406339 bp

Protein-coding Genes

2123 genes

Non-Coding Genes

194 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
autoinducer-2 kinaseE6A58_00910Not AvailableNegative147879 - 14943256535.2
transcriptional regulator lsrrE6A58_00915Not AvailableNegative149486 - 15044535351.2
autoinducer 2 abc transporter atp-binding protein lsraE6A58_00920Not AvailablePositive150662 - 15217055531.2
autoinducer 2 abc transporter permease lsrcE6A58_00925Not AvailablePositive152179 - 15317735329.7
autoinducer 2 import system permease lsrdE6A58_00930Not AvailablePositive153174 - 15415734617.7
autoinducer 2 abc transporter substrate-binding protein lsrbE6A58_00935Not AvailablePositive154270 - 15528936733.1
3-hydroxy-5-phosphonooxypentane-2,4-dione thiolaseE6A58_00940Not AvailablePositive155308 - 15618631764.3
(4s)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomeraseE6A58_00945Not AvailablePositive156252 - 15655412231.7
hypothetical proteinE6A58_00950Not AvailablePositive156547 - 15725726689.5
30s ribosomal protein s10E6A58_00955Not AvailablePositive157519 - 15783011767.3

Displaying genes 301 – 310 of 2317 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PneumoniaCausesPMC281138
Bovine respiratory diseaseCausesPMC12473052
BrdCausesPMC12473052
Bovine respiratory disease complexCausesPMC12943494
BrdcCausesPMC12943494

Displaying health effects 1 – 5 of 5 in total