Histophilus somni str. UOC-EPH-KLM-013

Gram-negativeRodAerobe; facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Histophilus

Description

Histophilus somni str. UOC-EPH-KLM-013 is a Gram-negative, rod-shaped bacterium that exhibits facultative anaerobic metabolism, allowing it to thrive in varying oxygen environments. This strain is optimally active at a temperature of 35.0°C, which is typical of the physiological conditions found in its host-associated habitat. As a member of the genus Histophilus, this bacterium is adapted to living in association with animal hosts, reflecting its potential role in the microbiota of specific wildlife or livestock species. The facultative anaerobic nature of H. somni str. UOC-EPH-KLM-013 suggests it can survive in both aerobic and anaerobic environments, which may facilitate its colonization and persistence in diverse biological niches within its host. The ability to thrive at a temperature close to that of the mammalian body indicates that this strain may have evolved mechanisms to endure host-specific challenges, further underscoring its ecological significance. Understanding the characteristics of this strain can provide insights into its interactions within the host and potential implications for host health, given the complexities of host-associated microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusHistophilus
SpeciesHistophilus somni
StrainUOC-EPH-KLM-013

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranes2
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; facultative anaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipNot Available
Host(s)Bos taurus, Bos
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Histophilus somni strain UOC-EPH-KLM-013 Contig_197, whole genome

Gene Summary

Adenine Count

759889 bp

Thymine Count

757514 bp

Guanine Count

456321 bp

Cytosine Count

432615 bp

Genome Length

2406339 bp

Protein-coding Genes

2123 genes

Non-Coding Genes

194 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide chain release factor 2E6A58_04605Not AvailableNegative930031 - 93112941240.5
bifunctional protein-disulfide isomerase/oxidoreductase dsbcE6A58_04610Not AvailablePositive931266 - 93195826068.2
single-stranded-dna-specific exonuclease recjE6A58_04615Not AvailablePositive931951 - 93367263983.7
5'-methylthioadenosine/adenosylhomocysteine nucleosidaseE6A58_04625Not AvailablePositive933867 - 93455623969.2
50s ribosomal protein l31E6A58_04630Not AvailableNegative934627 - 9348397834.41
putative transporterE6A58_04635Not AvailableNegative935035 - 93669359241.4
abc transporter atp-binding protein/permeaseE6A58_04640Not AvailablePositive936888 - 93868469056.1
anaerobic ribonucleoside-triphosphate reductaseE6A58_04645Not AvailablePositive938969 - 94109580152.9
anaerobic ribonucleoside-triphosphate reductase-activating proteinE6A58_04650Not AvailablePositive941111 - 94157818090.8
type i glyceraldehyde-3-phosphate dehydrogenaseE6A58_04655Not AvailableNegative941754 - 94275835558.4

Displaying genes 1021 – 1030 of 2317 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
PneumoniaCausesPMC281138
Bovine respiratory diseaseCausesPMC12473052
BrdCausesPMC12473052
Bovine respiratory disease complexCausesPMC12943494
BrdcCausesPMC12943494

Displaying health effects 1 – 5 of 5 in total