Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Avibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Avibacterium |
| Species | Avibacterium paragallinarum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Gallus gallus, Aves |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Avibacterium paragallinarum strain CL AvpgCL_contig_154, whole
Gene Summary
Adenine Count
707100 bp
Thymine Count
708336 bp
Guanine Count
500030 bp
Cytosine Count
495330 bp
Genome Length
2410835 bp
Protein-coding Genes
2168 genes
Non-Coding Genes
164 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Holin | Z012_05790 | Not Available | Negative | 1167266 - 1167499 | 8804.58 |
| Tail tube | Z012_05795 | Not Available | Negative | 1167586 - 1168041 | 16379.5 |
| Tail sheath | Z012_05800 | Not Available | Negative | 1168046 - 1169173 | 41729.4 |
| Virion morphogenesis family protein | Z012_05805 | Not Available | Negative | 1169216 - 1169938 | 28167.4 |
| Tail completion protein r | Z012_05810 | Not Available | Negative | 1169945 - 1170421 | 18340.6 |
| Head completion/stabilization protein | Z012_05815 | Not Available | Negative | 1170409 - 1170861 | 16958.5 |
| Terminase endonuclease subunit | Z012_05820 | Not Available | Negative | 1170854 - 1171675 | 30875.9 |
| Capsid protein | Z012_05825 | Not Available | Negative | 1171688 - 1172698 | 36907.8 |
| Capsid-scaffolding protein | Z012_05830 | Not Available | Negative | 1172701 - 1173600 | 33029.6 |
| Terminase atpase subunit | Z012_05835 | Not Available | Positive | 1173762 - 1175585 | 69942.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infectious coryza | Causes | PMC10269479 |
| Infectious coryza | Causes | PMC11909890 |
| Avian infectious coryza | Causes | PMC11909890 |
| Infectious coryza | Causes | PMC8913951 |
| Ic | Causes | PMC8913951 |
