Vibrio mediterranei str. 117-T6

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio mediterranei str. 117-T6 is a bacterium characterized by its single replicon genome, which is documented under the accession number NZ_CP033579.1. This strain is uniquely adapted to the specific habitats of the Sundarbans Forest and the Sundarbans mangrove, suggesting a specialization to brackish or coastal environments typically found in mangrove ecosystems. The presence of Vibrio mediterranei str. 117-T6 in such diverse and rich habitats like the Sundarbans indicates potential roles in nutrient cycling and interactions with other microbial communities. Its adaptation to the mangrove environment may involve unique metabolic pathways or ecological functions, which could contribute to the overall health and stability of these ecosystems. Understanding the specific attributes and behaviors of this strain can provide insights into the ecological dynamics of mangrove habitats and the broader implications for microbial diversity in coastal regions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio mediterranei
Strain117-T6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio mediterranei str. 117-T6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSundarbans Forest; Sundarbans mangrove
Biotic relationshipNot Available
Host(s)Crassostrea virginica
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio mediterranei strain 117-T6 plasmid unnamed, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter permease subunitECB94_RS27530Not AvailablePositive150466 - 153567112605.0
hypothetical proteinECB94_RS28130Not AvailableNegative153617 - 15410518808.4
duf418 domain-containing proteinECB94_RS27540Not AvailablePositive154294 - 15533439639.2
lysr family transcriptional regulatorECB94_RS27545Not AvailablePositive155459 - 15634932848.4
lysr family transcriptional regulatorECB94_RS27550Not AvailablePositive156357 - 15726233902.6
hd-gyp domain-containing proteinECB94_RS27555Not AvailablePositive158224 - 15981660402.3
dde-type integrase/transposase/recombinaseECB94_RS27560Not AvailablePositive160429 - 16111024831.5
hypothetical proteinECB94_RS27570Not AvailablePositive162036 - 16241014143.5
winged helix-turn-helix domain-containing proteinECB94_RS27575Not AvailablePositive162629 - 16315619449.7
dde-type integrase/transposase/recombinaseECB94_RS27580Not AvailablePositive163277 - 16395625317.7

Displaying genes 161 – 170 of 200 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.