Vibrio fluvialis

Gram-negativeMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio fluvialis is a gram-negative, motile bacterium that primarily thrives in coastal and estuarine environments, as well as in fresh and marine waters. As an aerobic organism, it requires oxygen for growth and metabolic processes. This microbe is known to exhibit pathogenicity towards both animals and humans, indicating its potential role in aquatic ecosystems and its impact on health. Genetically, Vibrio fluvialis has a singular replicon, and its genomic information can be accessed via the accession number NZ_CP014035.2. The presence of this bacterium in diverse aquatic habitats suggests that it may play a role in the microbial dynamics of these ecosystems, potentially influencing nutrient cycling and interactions with other microorganisms. Understanding the ecology of Vibrio fluvialis can provide insights into its behavior in fluctuating environmental conditions and its relationships with host organisms within its habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio fluvialis
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio fluvialis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatcoastal environments; estuarine environments; Fresh water; Marine
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityAnimal; Human

Genome Summary

Vibrio fluvialis strain ATCC 33809 chromosome 2, complete

Gene Summary

Adenine Count

789999 bp

Thymine Count

786691 bp

Guanine Count

792080 bp

Cytosine Count

787068 bp

Genome Length

3155838 bp

Protein-coding Genes

2811 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1107 domain-containing proteinAL536_RS30710Not AvailableNegative55125 - 553318165.16
aminoacyl-trna deacylaseAL536_RS30715Not AvailableNegative55901 - 5637717455.4
pp_00043AL536_RS30720Not AvailableNegative56370 - 57341Not Available
succinate dehydrogenase assembly factor 2AL536_RS30725Not AvailablePositive57491 - 577519952.93
protein ygfxAL536_RS30730Not AvailablePositive57795 - 5811212084.1
l-aspartate oxidaseAL536_RS30735Not AvailableNegative58131 - 5974160132.1
rna polymerase sigma factor rpoeAL536_RS30740Not AvailablePositive60211 - 6078321502.6
sigma-e factor negative regulatory proteinAL536_RS30745Not AvailablePositive60814 - 6144322887.7
sigma-e factor regulatory protein rsebAL536_RS30750Not AvailablePositive61440 - 6240836103.1
soxr reducing system rsec family proteinAL536_RS30755Not AvailablePositive62405 - 6287516748.8

Displaying genes 41 – 50 of 2811 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

90 records
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Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014042Oxoglutaric acidC5H6O5Chemical structure of Oxoglutaric acid328-50-7
Average146.0981Da
Monoisotopic146.021523302Da
BASm0014045Propionic acidC3H6O2Chemical structure of Propionic acid79-09-4
Average74.0785Da
Monoisotopic74.036779436Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 90 metabolites

Health Effects

Health ConditionRelationReference
Diarrheal outbreaksCausesPMC10882959
VibriosisCausesPMC8416912
GastroenteritisCausesPMC8416912
DiarrhoeaCausesPMC8416912
Acute gastroenteritisCausesPMC8942032
Watery diarrhoeaCausesPMC8942032
Bloody diarrhoeaCausesPMC8942032
Acute gastroenteritisCausesPMC11027346

Displaying health effects 1 – 8 of 8 in total