Vibrio mimicus

Gram-positiveCurved rodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio mimicus is a Gram-positive, curved rod bacterium known for its motility and facultative anaerobic metabolism. This microbe thrives in various aquatic environments, including fresh and marine waters, as well as in sediments and shrimp processing facilities. Its presence in sea foods further highlights its association with aquatic habitats. Vibrio mimicus is characterized by a single replicon in its genomic structure, with the genome accessible under the accession number LOSJ00000000.2. This genomic information may provide insights into its biological functions and ecological interactions in its preferred environments. Given its adaptability to both oxygen-rich and low-oxygen conditions, Vibrio mimicus likely plays an important role in nutrient cycling within aquatic ecosystems. Its association with commercial seafood also underscores the significance of monitoring such bacteria in food safety and environmental health contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio mimicus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCurved rod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio mimicus
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataquatic environments; aquatic/estuarine environment; Fresh water; Marine; sea foods; sediment; shrimp processing facility; water
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio mimicus strain FDAARGOS_113 unitig_0_quiver_quiver_pilon,

Gene Summary

Adenine Count

1188275 bp

Thymine Count

1196630 bp

Guanine Count

1026518 bp

Cytosine Count

1020670 bp

Genome Length

4432093 bp

Protein-coding Genes

3955 genes

Non-Coding Genes

208 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
aminopeptidase pepbAL544_017055Not AvailablePositive3524168 - 352545746764.7
nucleoside-diphosphate kinaseAL544_017060Not AvailablePositive3525661 - 352608915999.2
bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmnAL544_017065Not AvailablePositive3526250 - 352737142157.9
cytoskeleton protein rodzAL544_017070Not AvailablePositive3527685 - 352869236497.9
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseAL544_017075Not AvailablePositive3528697 - 352982740899.3
histidine--trna ligaseAL544_017080Not AvailablePositive3529853 - 353112146880.4
hypothetical proteinAL544_017085Not AvailablePositive3531159 - 353177322374.2
outer membrane protein assembly factor bambAL544_017090Not AvailablePositive3531786 - 353294641305.1
ribosome biogenesis gtpase derAL544_017095Not AvailablePositive3533144 - 353462855608.8
metal-dependent hydrolaseAL544_017100Not AvailablePositive3534683 - 353555232346.1

Displaying genes 3341 – 3350 of 4163 in total

Metabolites

10 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003212N(6)-acetyl-N(6)-hydroxy-L-lysineC8H16N2O4Chemical structure of N(6)-acetyl-N(6)-hydroxy-L-lysineNot available
Average204.226Da
Monoisotopic204.111007003Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0004512N(2)-citryl-N(6)-acetyl-N(6)-hydroxy-L-lysineC14H19N2O10Chemical structure of N(2)-citryl-N(6)-acetyl-N(6)-hydroxy-L-lysineNot available
Average375.312Da
Monoisotopic375.1056156Da
BASm0016958Desferrioxamine EC27H48N6O9Chemical structure of Desferrioxamine ENULL
Average600.714Da
Monoisotopic600.34827715Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039904EnterobacterNot availableNot availableNot available
BASm0039967Haemophilus influenzae Rd KW20Not available15106-57-7Not available
BASm0040248[Clostridium] leptum DSM 753Not availableNot availableNot available

Displaying 1–10 of 10 metabolites

Health Effects

Health ConditionRelationReference
Diarrheal diseaseCausesPMC10521627
Cholera-like illnessCausesPMC10521627
Cholera-like diarrheaCausesPMC11286048
GastroenteritisCausesPMC11286048
Diseases in humansCausesPMC4701432
VibriosisCausesPMC8416912
GastroenteritisCausesPMC8416912

Displaying health effects 1 – 7 of 7 in total