Vibrio mimicus

Gram-positiveCurved rodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio mimicus is a Gram-positive, curved rod bacterium known for its motility and facultative anaerobic metabolism. This microbe thrives in various aquatic environments, including fresh and marine waters, as well as in sediments and shrimp processing facilities. Its presence in sea foods further highlights its association with aquatic habitats. Vibrio mimicus is characterized by a single replicon in its genomic structure, with the genome accessible under the accession number LOSJ00000000.2. This genomic information may provide insights into its biological functions and ecological interactions in its preferred environments. Given its adaptability to both oxygen-rich and low-oxygen conditions, Vibrio mimicus likely plays an important role in nutrient cycling within aquatic ecosystems. Its association with commercial seafood also underscores the significance of monitoring such bacteria in food safety and environmental health contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio mimicus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCurved rod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio mimicus
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitataquatic environments; aquatic/estuarine environment; Fresh water; Marine; sea foods; sediment; shrimp processing facility; water
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio mimicus strain FDAARGOS_113 unitig_0_quiver_quiver_pilon,

Gene Summary

Adenine Count

1188275 bp

Thymine Count

1196630 bp

Guanine Count

1026518 bp

Cytosine Count

1020670 bp

Genome Length

4432093 bp

Protein-coding Genes

3955 genes

Non-Coding Genes

208 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-tyrosyl-trna(tyr) deacylaseAL544_012765Not AvailableNegative2633722 - 263415615784.0
yihy/virulence factor brkb family proteinAL544_012770Not AvailableNegative2634128 - 263505734434.5
atpaseAL544_012775Not AvailableNegative2635084 - 263561419673.5
translational gtpase typaAL544_012780Not AvailableNegative2635713 - 263754267203.7
hypothetical proteinAL544_012785Not AvailableNegative2637554 - 26377366491.63
glutamate--ammonia ligaseAL544_012790Not AvailablePositive2638029 - 263943851872.4
duf4124 domain-containing proteinAL544_012795Not AvailablePositive2639616 - 264020321419.6
nitrogen regulation protein nr(ii)AL544_012800Not AvailablePositive2640340 - 264139839333.7
nitrogen regulation protein nr(i)AL544_012805Not AvailablePositive2641408 - 264280852199.7
sensor domain-containing phosphodiesteraseAL544_012810Not AvailablePositive2642868 - 264539394355.8

Displaying genes 2521 – 2530 of 4163 in total

Metabolites

6 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003212N(6)-acetyl-N(6)-hydroxy-L-lysineC8H16N2O4Chemical structure of N(6)-acetyl-N(6)-hydroxy-L-lysineNot available
Average204.226Da
Monoisotopic204.111007003Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0004512N(2)-citryl-N(6)-acetyl-N(6)-hydroxy-L-lysineC14H19N2O10Chemical structure of N(2)-citryl-N(6)-acetyl-N(6)-hydroxy-L-lysineNot available
Average375.312Da
Monoisotopic375.1056156Da
BASm0016958Desferrioxamine EC27H48N6O9Chemical structure of Desferrioxamine ENULL
Average600.714Da
Monoisotopic600.34827715Da

Displaying 1–6 of 6 metabolites

Health Effects

Health ConditionRelationReference
Diarrheal diseaseCausesPMC10521627
Cholera-like illnessCausesPMC10521627
Cholera-like diarrheaCausesPMC11286048
GastroenteritisCausesPMC11286048
Diseases in humansCausesPMC4701432
VibriosisCausesPMC8416912
GastroenteritisCausesPMC8416912

Displaying health effects 1 – 7 of 7 in total