Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Danio rerio, Pancrustacea |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Genome Summary
Vibrio parahaemolyticus strain NA2 contig81, whole genome shotgun
Gene Summary
Adenine Count
1503030 bp
Thymine Count
1509893 bp
Guanine Count
1266974 bp
Cytosine Count
1226470 bp
Genome Length
5512119 bp
Protein-coding Genes
5167 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2061 domain-containing protein | EGL64_21830 | Not Available | Negative | 4507573 - 4507977 | 14931.3 |
| valine--trna ligase | EGL64_21835 | Not Available | Negative | 4508189 - 4511047 | 108676.0 |
| dna polymerase iii subunit chi | EGL64_21840 | Not Available | Negative | 4511142 - 4511591 | 17107.1 |
| cytosol aminopeptidase | EGL64_21845 | Not Available | Negative | 4511706 - 4513214 | 54481.6 |
| lps export abc transporter permease lptf | EGL64_21850 | Not Available | Positive | 4513416 - 4514516 | 40563.0 |
| lipopolysaccharide abc transporter permease lptg | EGL64_21855 | Not Available | Positive | 4514520 - 4515590 | 39521.8 |
| rdd family protein | EGL64_21860 | Not Available | Negative | 4515640 - 4516119 | 17441.7 |
| duf2254 domain-containing protein | EGL64_21865 | Not Available | Negative | 4516302 - 4517570 | 46728.0 |
| sdr family nad(p)-dependent oxidoreductase | EGL64_21870 | Not Available | Positive | 4517874 - 4518539 | 23911.5 |
| Trna-leu | Not Available | Not Available | Positive | 4518874 - 4518958 | Not Available |
Pathways
1174 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Vibriosis | Causes | PMC10472736 |
| Acute gastroenteritis | Causes | PMC11171697 |
| Wound infections | Causes | PMC11171697 |
| Septicemia | Causes | PMC11171697 |
| Food poisoning | Causes | PMC12108532 |
| Vibrio infections | Causes | PMC12108532 |
| Acute gastroenteritis | Causes | PMC12849298 |
| Wound infections | Causes | PMC12849298 |
| Ear infections | Causes | PMC12849298 |
| Septicemia | Causes | PMC12849298 |




