Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio parahaemolyticus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Aquatic |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Danio rerio, Pancrustacea |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Genome Summary
Vibrio parahaemolyticus strain NA2 contig81, whole genome shotgun
Gene Summary
Adenine Count
1503030 bp
Thymine Count
1509893 bp
Guanine Count
1266974 bp
Cytosine Count
1226470 bp
Genome Length
5512119 bp
Protein-coding Genes
5167 genes
Non-Coding Genes
180 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | EGL64_20150 | Not Available | Positive | 4170334 - 4171899 | 60144.8 |
| log family protein | EGL64_20155 | Not Available | Positive | 4172189 - 4173550 | 50617.0 |
| flap endonuclease xni | EGL64_20160 | Not Available | Positive | 4173624 - 4174406 | 29320.0 |
| dna/rna non-specific endonuclease | EGL64_20165 | Not Available | Positive | 4174600 - 4175352 | 28070.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | EGL64_20170 | Not Available | Negative | 4175443 - 4176534 | 41655.7 |
| duf423 domain-containing protein | EGL64_20175 | Not Available | Negative | 4176531 - 4176929 | 14413.3 |
| alpha/beta fold hydrolase | EGL64_20180 | Not Available | Negative | 4176919 - 4177542 | 22687.2 |
| transcriptional regulator gcva | EGL64_20185 | Not Available | Negative | 4177523 - 4178443 | 34502.3 |
| trna 4-thiouridine(8) synthase thii | EGL64_20190 | Not Available | Negative | 4178991 - 4180439 | 54634.6 |
| flagellar motor protein motb | EGL64_20195 | Not Available | Negative | 4180734 - 4181681 | 35557.3 |
Pathways
1174 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Vibriosis | Causes | PMC10472736 |
| Acute gastroenteritis | Causes | PMC11171697 |
| Wound infections | Causes | PMC11171697 |
| Septicemia | Causes | PMC11171697 |
| Food poisoning | Causes | PMC12108532 |
| Vibrio infections | Causes | PMC12108532 |
| Acute gastroenteritis | Causes | PMC12849298 |
| Wound infections | Causes | PMC12849298 |
| Ear infections | Causes | PMC12849298 |
| Septicemia | Causes | PMC12849298 |




