Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050319 bp
Thymine Count
1053584 bp
Guanine Count
958009 bp
Cytosine Count
947895 bp
Genome Length
4010099 bp
Protein-coding Genes
3629 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease cas3'' | D2930_03495 | Not Available | Positive | 738525 - 741461 | 110655.0 |
| hypothetical protein | D2930_03500 | Not Available | Positive | 741465 - 742412 | 35537.1 |
| hypothetical protein | D2930_03505 | Not Available | Positive | 742422 - 743477 | 39738.8 |
| type i-f crispr-associated endoribonuclease cas6/csy4 | D2930_03510 | Not Available | Positive | 743486 - 744037 | 20778.1 |
| duf4102 domain-containing protein | D2930_03520 | Not Available | Negative | 745849 - 747084 | 46776.4 |
| Trna-ser | Not Available | Not Available | Positive | 747397 - 747484 | Not Available |
| efflux rnd transporter permease subunit vexd | D2930_03530 | Not Available | Negative | 747696 - 750746 | 110809.0 |
| multidrug efflux rnd transporter periplasmic adaptor subunit vexc | D2930_03535 | Not Available | Negative | 750746 - 751840 | 39851.8 |
| membrane integrity-associated transporter subunit pqic | D2930_03540 | Not Available | Negative | 752056 - 752634 | 21763.2 |
| intermembrane transport protein pqib | D2930_03545 | Not Available | Negative | 752631 - 754259 | 60226.7 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





