Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050319 bp
Thymine Count
1053584 bp
Guanine Count
958009 bp
Cytosine Count
947895 bp
Genome Length
4010099 bp
Protein-coding Genes
3629 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii-b crispr module-associated protein cmr5 | D2930_16970 | Not Available | Negative | 3679972 - 3680400 | 15861.2 |
| type iii-b crispr module ramp protein cmr4 | D2930_16975 | Not Available | Negative | 3680404 - 3681282 | 32337.4 |
| crispr-associated protein cmr3 | D2930_16980 | Not Available | Negative | 3681306 - 3682466 | 42792.0 |
| type iii-b crispr-associated protein cas10/cmr2 | D2930_16985 | Not Available | Negative | 3682469 - 3684310 | 68116.4 |
| type iii-b crispr module ramp protein cmr1 | D2930_16990 | Not Available | Negative | 3684310 - 3685512 | 44692.4 |
| hypothetical protein | D2930_17095 | Not Available | Negative | 3702652 - 3705156 | 95414.4 |
| hypothetical protein | D2930_17100 | Not Available | Negative | 3705156 - 3707681 | 96846.7 |
| hypothetical protein | D2930_17105 | Not Available | Negative | 3707682 - 3708365 | 26503.2 |
| duf4113 domain-containing protein | D2930_17110 | Not Available | Negative | 3708611 - 3709585 | 36974.7 |
| preprotein translocase subunit sece | D2930_17115 | Not Available | Positive | 3709849 - 3710229 | 13276.5 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





