Vibrio cholerae str. VcCHNf9

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae str. VcCHNf9 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain exhibits a heterotrophic mode of metabolism, utilizing organic compounds for energy. It is classified as a facultative anaerobe, indicating its ability to thrive in both aerobic and anaerobic environments. The optimal temperature for growth is around 20.0°C, suggesting a preference for cooler conditions that may reflect its ecological niche. Vibrio cholerae str. VcCHNf9 is found in diverse habitats, which can include marine and freshwater environments, as well as estuarine ecosystems. This adaptability to various habitats may play a crucial role in its survival and proliferation, especially in fluctuating environmental conditions. Given its physiological traits and habitat versatility, V. cholerae str. VcCHNf9 may contribute to the dynamic microbial communities in aquatic systems, where it could engage in complex interactions with other microorganisms. The presence of this strain in multiple environments highlights the ecological significance of Vibrio species in nutrient cycling and their potential role in shaping microbial diversity in aquatic ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainVcCHNf9

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf9
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf9 Scaffold99, whole genome shotgun

Gene Summary

Adenine Count

1050319 bp

Thymine Count

1053584 bp

Guanine Count

958009 bp

Cytosine Count

947895 bp

Genome Length

4010099 bp

Protein-coding Genes

3629 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific tyrosine recombinase xerdD2930_00380Not AvailablePositive81228 - 8213634566.7
bifunctional protein-disulfide isomerase/oxidoreductase dsbcD2930_00385Not AvailablePositive82153 - 8290527396.1
single-stranded-dna-specific exonuclease recjD2930_00390Not AvailablePositive82964 - 8470364291.1
hypothetical proteinD2930_00395Not AvailablePositive85045 - 852337269.77
pyruvate dehydrogenase complex transcriptional repressor pdhrD2930_00400Not AvailablePositive85187 - 8595729386.2
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeD2930_00405Not AvailablePositive86007 - 8866799012.9
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferaseD2930_00410Not AvailablePositive88668 - 9057566060.7
dihydrolipoyl dehydrogenaseD2930_00415Not AvailablePositive90843 - 9227051012.0
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive92445 - 92846Not Available
16s rrna (cytosine(1402)-n(4))-methyltransferaseD2930_00425Not AvailablePositive93028 - 9397835128.0

Displaying genes 111 – 120 of 3750 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total