Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | D2924_02910 | Not Available | Positive | 645890 - 647299 | 52037.1 |
| tryptophan synthase subunit beta | D2924_02915 | Not Available | Positive | 647340 - 648530 | 42844.3 |
| tryptophan synthase subunit alpha | D2924_02920 | Not Available | Positive | 648530 - 649336 | 28493.3 |
| dicarboxylate/amino acid:cation symporter | D2924_02925 | Not Available | Positive | 649652 - 650908 | 43545.5 |
| thymidine kinase | D2924_02930 | Not Available | Negative | 651009 - 651587 | 21660.0 |
| aspartate--trna ligase | D2924_02935 | Not Available | Negative | 651684 - 653459 | 65851.5 |
| duf72 domain-containing protein | D2924_02940 | Not Available | Positive | 653751 - 654620 | 32983.8 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | D2924_02945 | Not Available | Positive | 654758 - 655486 | 27411.0 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | D2924_02950 | Not Available | Positive | 655598 - 656569 | 37342.1 |
| atp-dependent zn protease | D2924_02955 | Not Available | Positive | 656689 - 657426 | 27603.8 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





