Vibrio cholerae str. VcCHNf3

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf3 is a Gram-negative, rod-shaped bacterium that exists predominantly as single cells. This strain exhibits heterotrophic growth, indicating its reliance on organic compounds as a source of energy. VcCHNf3 is classified as a facultative anaerobe, which allows it to thrive in both aerobic and anaerobic environments. Its optimal growth temperature is around 20.0 °C, suggesting a preference for cooler habitats. The strain's ability to inhabit multiple environments highlights its ecological versatility and potential adaptability to varying conditions. This trait may reflect the broader adaptability of Vibrio cholerae as a genus, which is known to inhabit diverse aquatic environments, including both freshwater and marine ecosystems. Understanding the ecological niche of VcCHNf3 could provide insights into its survival strategies and interactions within its habitats. Further investigations into its metabolic capabilities and environmental interactions may yield important information regarding its role in microbial communities and potential responses to environmental stressors.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainVcCHNf3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf3 Scaffold140, whole genome shotgun

Gene Summary

Adenine Count

1044838 bp

Thymine Count

1043475 bp

Guanine Count

933395 bp

Cytosine Count

947542 bp

Genome Length

3969379 bp

Protein-coding Genes

3570 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerol-3-phosphate dehydrogenase subunit glpbD2924_01785Not AvailableNegative365602 - 36691248072.7
anaerobic glycerol-3-phosphate dehydrogenase subunit aD2924_01790Not AvailableNegative366909 - 36855259852.7
aquaporin family proteinD2924_01795Not AvailablePositive369207 - 37006129947.4
glycerol kinaseD2924_01800Not AvailablePositive370191 - 37170855595.9
hypothetical proteinD2924_01805Not AvailableNegative371789 - 3720409070.4
hypothetical proteinD2924_01810Not AvailableNegative372304 - 3724535522.02
duf496 family proteinD2924_01815Not AvailableNegative372453 - 37277312662.3
hypothetical proteinD2924_01820Not AvailablePositive372961 - 3731587609.44
duf480 domain-containing proteinD2924_01825Not AvailablePositive373200 - 37385024264.7
giy-yig nuclease family proteinD2924_01830Not AvailablePositive373850 - 37415511149.7

Displaying genes 371 – 380 of 3693 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total