Vibrio cholerae str. VcCHNf3

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio cholerae strain VcCHNf3 is a Gram-negative, rod-shaped bacterium that exists predominantly as single cells. This strain exhibits heterotrophic growth, indicating its reliance on organic compounds as a source of energy. VcCHNf3 is classified as a facultative anaerobe, which allows it to thrive in both aerobic and anaerobic environments. Its optimal growth temperature is around 20.0 °C, suggesting a preference for cooler habitats. The strain's ability to inhabit multiple environments highlights its ecological versatility and potential adaptability to varying conditions. This trait may reflect the broader adaptability of Vibrio cholerae as a genus, which is known to inhabit diverse aquatic environments, including both freshwater and marine ecosystems. Understanding the ecological niche of VcCHNf3 could provide insights into its survival strategies and interactions within its habitats. Further investigations into its metabolic capabilities and environmental interactions may yield important information regarding its role in microbial communities and potential responses to environmental stressors.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio cholerae
StrainVcCHNf3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Vibrio cholerae str. VcCHNf3
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature20
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Mollusca, Mammalia
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityHuman

Genome Summary

Vibrio cholerae strain VcCHNf3 Scaffold140, whole genome shotgun

Gene Summary

Adenine Count

1044838 bp

Thymine Count

1043475 bp

Guanine Count

933395 bp

Cytosine Count

947542 bp

Genome Length

3969379 bp

Protein-coding Genes

3570 genes

Non-Coding Genes

123 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome-c oxidase, cbb3-type subunit iiD2924_14860Not AvailableNegative3215942 - 321656223631.2
cytochrome-c oxidase, cbb3-type subunit iD2924_14865Not AvailableNegative3216576 - 321800953645.9
hypothetical proteinD2924_14870Not AvailablePositive3218238 - 321861814229.2
histidine kinaseD2924_14875Not AvailablePositive3218687 - 321990444386.8
response regulatorD2924_14880Not AvailablePositive3219901 - 322161964553.3
type i secretion system permease/atpaseD2924_14885Not AvailableNegative3221680 - 322384579731.6
hlyd family type i secretion periplasmic adaptor subunitD2924_14890Not AvailableNegative3223848 - 322520951404.8
peptidase domain-containing abc transporterD2924_14895Not AvailableNegative3225206 - 322736881275.2
peptide chain release factor 1D2924_14900Not AvailablePositive3227726 - 32279839198.11
toxin-activating lysine-acyltransferase rtxcD2924_14905Not AvailablePositive3228009 - 322847017895.6

Displaying genes 2921 – 2930 of 3693 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
CholeraCausesPMC10103850
Ear infectionsCausesPMC10103850
Wound infectionsCausesPMC10103850
SepticaemiaCausesPMC10103850
Gastrointestinal infectionsCausesPMC10103850
Necrotizing fasciitisCausesPMC10103850
VibriosisCausesPMC10472736
PneumoniaCausesPMC12801787
GastroenteritisCausesPMC12801787
SinusitisCausesPMC12801787

Displaying health effects 1 – 10 of 38 in total