Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio cholerae |
| Strain | VcCHNf3 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Mollusca, Mammalia |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1044838 bp
Thymine Count
1043475 bp
Guanine Count
933395 bp
Cytosine Count
947542 bp
Genome Length
3969379 bp
Protein-coding Genes
3570 genes
Non-Coding Genes
123 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit ii | D2924_14860 | Not Available | Negative | 3215942 - 3216562 | 23631.2 |
| cytochrome-c oxidase, cbb3-type subunit i | D2924_14865 | Not Available | Negative | 3216576 - 3218009 | 53645.9 |
| hypothetical protein | D2924_14870 | Not Available | Positive | 3218238 - 3218618 | 14229.2 |
| histidine kinase | D2924_14875 | Not Available | Positive | 3218687 - 3219904 | 44386.8 |
| response regulator | D2924_14880 | Not Available | Positive | 3219901 - 3221619 | 64553.3 |
| type i secretion system permease/atpase | D2924_14885 | Not Available | Negative | 3221680 - 3223845 | 79731.6 |
| hlyd family type i secretion periplasmic adaptor subunit | D2924_14890 | Not Available | Negative | 3223848 - 3225209 | 51404.8 |
| peptidase domain-containing abc transporter | D2924_14895 | Not Available | Negative | 3225206 - 3227368 | 81275.2 |
| peptide chain release factor 1 | D2924_14900 | Not Available | Positive | 3227726 - 3227983 | 9198.11 |
| toxin-activating lysine-acyltransferase rtxc | D2924_14905 | Not Available | Positive | 3228009 - 3228470 | 17895.6 |
Pathways
62 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Cholera | Causes | PMC10103850 |
| Ear infections | Causes | PMC10103850 |
| Wound infections | Causes | PMC10103850 |
| Septicaemia | Causes | PMC10103850 |
| Gastrointestinal infections | Causes | PMC10103850 |
| Necrotizing fasciitis | Causes | PMC10103850 |
| Vibriosis | Causes | PMC10472736 |
| Pneumonia | Causes | PMC12801787 |
| Gastroenteritis | Causes | PMC12801787 |
| Sinusitis | Causes | PMC12801787 |





